Is running vm-unsupported app on hyper-v matter?

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I'd like to run some apps which is not supporting hyper-v, vm on hyper-v. I wanna know is it matter.I assume virtualized environment is exaxtly same as the host machine thoughEspecially as far as I know, hyper-v does support hypervisor which means no over-head?But I've seen some apps for enterprises like abbyy finereader claiming that they're perfectly compatible with virtual environment, that makes me bit concerning

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