Help!! My PC used USB storage instead of SSD.

[Windows 11]

So I built a custom PC and I noticed that my PC is using my USB drive as the main storage device instead of my m.2 SSD. The USB contained the Windows Installation Media so I used that to download Windows. In the bios setting, I have my m.2 SSD as the main boot priority, but even then, I think the OS was installed the USB drive and downloaded most of the drives, apps, and hardware on it as well. Because of this, I can no longer get windows updates because of insufficient storage. Is there a way to make the storage use my SSD instead of the USB? How will I be able to transfer all the data (apps,

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